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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912006.1_cds_XP_016462009.1_55278
CDS Infomation

[gene=LOC107785261] [db_xref=GeneID:107785261] [protein=DNA polymerase kappa-like] [protein_id=XP_016462009.1] [location=join(9712..9805,10016..10188,11037..11210,11399..11522,11609..11709,11859..11945,12257..12352,12480..12600,12850..12978,13149..13240,13330..13441,14495..14823,14928..15238,15390..15513)] [gbkey=CDS]
Sequence

ATGGCGAAGAGCCAAACCTCAGTAGGAAGTGAAGAGCCTTCTTCCTCTCGCCCATGGGAA
TCTTATCACACAGTCTACACCAGCGCCAAAGCTGGAATGGAAGGAGTGGACAAGGAAAAA
GTGCAGAGGATAGTGTATGAAATGAGTAAAGGGTCAAAGTATTTTGAGAATGAGGAAAAG
AAGGAAGCTTATATGAAGCAGAAAATTGAGAACATGCGTGCTCAGTACTCTAAACTTACT
CCACAAGATATATCTCATCATCAGAAGATGGCTGACAAAAGGATTTTAGAGCTAGAAGCC
ACACGTGATTTGTCAAGGATTTGGCTGCATGTGGATATGGATGCTTTTTACGCAGCTGTT
GAAACTTTGTGTAATCCTTCATTAAAAGGGAAGCCAATGGCTGTTGGCAGCATGTCCATG
ATTTCCACGGCTAGTTATGAGGCCCGTAAATTTGGTGTTCGTGCTGCGATGCCTGGATTT
ATTGCACGCAAACTATGTCCAGAGTTGTTATTTGTCCCTGTAGACTTTCAGAAGTATACT
CATTACAGTGACTTAACAAGGAAAGTTTTTCAGAATTATGATCCGAACTTTCTGGCTGCT
AGCTTGGATGAGGCATACCTTGATATTACTACTGTTTGCGAAGAGAGAGGCATTACGGGT
GGAGAAGTGGCTGAAGAGCTCAGACAAAGTGTACACCTTGAGACAGGTCTCGCGTGTAGC
GCTGGAGTGGCACCAAACCGCTTACTTGCTAAGGTTTGTTCGGATATCAACAAACCTAAT
GGCCAGTTTGTTTTGCCAAATGATCGAAGTGCTATCATGACATTTATTTCTTCACTTCCA
ATAAGGAAGATCGGGGGCATCGGTAAGGTCACCGAACGCATTTTAAATGATGTCTTTGGA
ATAACAACCTGTGAGGATATGCTGCAAAAGAGTAGTTTCATTTGTGCCCTGTTTTCTCGT
TCTTCAGCAGACTTTTTCCTTTCCGTCGGTCTAGGGCTTGGCGGAACTGATACTCCTCAA
TATAAGATGCGAAAGAGTATAAGTAATGAAAGAACTTTTTCAGCCACTGAGGATGAAGCT
TTGCTTTTTCAAAAATTAGTTGATCTATCAGAGATGCTTTCTGCTGATATGATAAAGGAG
GGTCTTTTTGGGCGAACATTGACGCTAAAACTGAAAACCATATCCTTTGAGGTTCGAACT
CGAGCGGTGACTTTGCCTAGTTACATATGCTCAAGTGAAGAAATCTTGAAACATGCTTCA
AAGCTGCTGAAGGCCGAATTTCCTGTTTCTTTGAGACTCATGGGACTTCGTATGTCTCAT
TTCAGTGACGACAAAAATGGCATTCCAGCTGATCCTACTCAAAAAACCCTTTCTGATTTC
ATTCTTTCCGGAGATGCTTCTGGAGGAAAGATGAGTGATTACAGGCCCTTGGTTTTTGAT
GTTTGTGATAATACTTTCTCAGTTAATTTGAATTGTTGTCCTACCTACTCTGCTGAGACA
TCTTGTGATCTGCGTGACTCGTCAATGGAGAACCAGACATCAGATTCTACTTTCAGTTGC
AGGATATTAGGGAACATTAATGAAGAATTGAATGGAACTGTTGTACCTCAAAGTAGTGAA
CCTGGAGCTAAGGTTCATGAACCAACAAATACTGATCATAAAATGAAGTCTGAGAAGATC
GACTCTTACACAGGTCAATTGGAGGCATGCCACCGGGATAGTTGGAAAAATGGTTTTAGC
TGTGTGGCTGATGAAGCAGGGTCTATATCAGATCAGAAGCAATTCTTTGTTTGGGTGGAT
GACTACAAATGCTCTATTTGTAGTATTGAGCTGCCTCCAAGTTTCACTGAAGAAAGGCAA
GAACATTCTGATTTTCATCTTGCTGAAAGGCTGCAAGGTGAAGAATCAGGTAACAACCAC
AGGAGTTTCGTGCGACAACAGAGGGCTGCCCAAAAAGGCCATACTGGAAGCAGCGGTCGG
CAGAAAAAGAAACAGAAATCATCTCCAACTGCTAGCAAATATGTACCAATTGATGCGTTC
TTTGTCAAATCAAACCAGAACTTTTGA

Peptide Sequence

PEP ID

XP_016462009.1
PEP Infomation

PREDICTED: DNA polymerase kappa-like [Nicotiana tabacum]
Sequence

MAKSQTSVGSEEPSSSRPWESYHTVYTSAKAGMEGVDKEKVQRIVYEMSKGSKYFENEEK
KEAYMKQKIENMRAQYSKLTPQDISHHQKMADKRILELEATRDLSRIWLHVDMDAFYAAV
ETLCNPSLKGKPMAVGSMSMISTASYEARKFGVRAAMPGFIARKLCPELLFVPVDFQKYT
HYSDLTRKVFQNYDPNFLAASLDEAYLDITTVCEERGITGGEVAEELRQSVHLETGLACS
AGVAPNRLLAKVCSDINKPNGQFVLPNDRSAIMTFISSLPIRKIGGIGKVTERILNDVFG
ITTCEDMLQKSSFICALFSRSSADFFLSVGLGLGGTDTPQYKMRKSISNERTFSATEDEA
LLFQKLVDLSEMLSADMIKEGLFGRTLTLKLKTISFEVRTRAVTLPSYICSSEEILKHAS
KLLKAEFPVSLRLMGLRMSHFSDDKNGIPADPTQKTLSDFILSGDASGGKMSDYRPLVFD
VCDNTFSVNLNCCPTYSAETSCDLRDSSMENQTSDSTFSCRILGNINEELNGTVVPQSSE
PGAKVHEPTNTDHKMKSEKIDSYTGQLEACHRDSWKNGFSCVADEAGSISDQKQFFVWVD
DYKCSICSIELPPSFTEERQEHSDFHLAERLQGEESGNNHRSFVRQQRAAQKGHTGSSGR
QKKKQKSSPTASKYVPIDAFFVKSNQNF

Transcript Sequence

Gene sequence data has not been registered.